Phylogeny

A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan

Genetics / Microbiology / Phylogeny / Mitochondrial DNA / Cytochrome c oxidase / Plants / Phylogenetic analysis / Green Algae / Tryptophan / Red Algae / Phylogenetic Tree / Codon / Base Sequence / Genetic Code / Plants / Phylogenetic analysis / Green Algae / Tryptophan / Red Algae / Phylogenetic Tree / Codon / Base Sequence / Genetic Code

Bayesian phylogenetic inference using DNA sequences: a Markov Chain Monte Carlo Method

Evolutionary Biology / Genetics / Algorithms / Sequence Analysis / Bayesian Analysis / Primates / Phylogeny / Mitochondrial DNA / Markov Chain Monte Carlo / Animals / Molecular biology and evolution / Molecular phylogeny / Markov chain monte carlo methods / Phylogenetic Tree / Bayes Theorem / Monte Carlo Method / Biochemistry and cell biology / Bayesian Estimator / DNA sequence / Primates / Phylogeny / Mitochondrial DNA / Markov Chain Monte Carlo / Animals / Molecular biology and evolution / Molecular phylogeny / Markov chain monte carlo methods / Phylogenetic Tree / Bayes Theorem / Monte Carlo Method / Biochemistry and cell biology / Bayesian Estimator / DNA sequence

Functional characterization of B class MADS-box transcription factors in Gerbera hybrida

Botany / Plant Biology / Flower Development / DNA / Phylogeny / Experimental Botany / Flowers / Phylogenetic analysis / Tomato / Asteraceae / Phenotype / Transcription Factor / Evo Devo / Gene Function / Protein Binding / Expression analysis / Gene expression profiling / Plant Epidermis / Down-Regulation / Experimental Botany / Flowers / Phylogenetic analysis / Tomato / Asteraceae / Phenotype / Transcription Factor / Evo Devo / Gene Function / Protein Binding / Expression analysis / Gene expression profiling / Plant Epidermis / Down-Regulation

Phylogeny of protozoa deduced from 5S rRNA sequences

Evolutionary Biology / Genetics / Molecular Evolution / Phylogeny / Animals / Green Algae / Chlamydomonas / Secondary Structure / Phylogenetic Tree / Species Specificity / Vascular Plants / Base Sequence / Nucleic Acid Conformation / Biochemistry and cell biology / Green Algae / Chlamydomonas / Secondary Structure / Phylogenetic Tree / Species Specificity / Vascular Plants / Base Sequence / Nucleic Acid Conformation / Biochemistry and cell biology

Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences

Computational Biology / Multidisciplinary / Phylogeny / Humans / Bacteria / PLoS one / Adult / Gastrointestinal Tract / Metagenome / PLoS one / Adult / Gastrointestinal Tract / Metagenome

A Two-locus Molecular Characterization of Paramecium calkinsi

Polymorphism / Russia / Biological Sciences / Phylogeny / Mitochondrial DNA / Molecular phylogeny / Tetrahymena / Cell nucleus / Ecosystem / Molecular Characterization / Genetic variation / LSU rDNA / Species Specificity / Protist / Nucleotides / Paramecium / Molecular phylogeny / Tetrahymena / Cell nucleus / Ecosystem / Molecular Characterization / Genetic variation / LSU rDNA / Species Specificity / Protist / Nucleotides / Paramecium

Variation in ribosomal and mitochondrial DNA sequences demonstrates the existence of intraspecific groups in Paramecium multimicronucleatum (Ciliophora, Oligohymenophorea)

Evolutionary Biology / Genetics / Zoology / Mitochondria / Phylogeny / Mitochondrial DNA / Molecular phylogeny / Molecular Phylogenetics and Evolution / Molecular phylogenetics / Genetic variation / Paramecium / Mitochondrial DNA / Molecular phylogeny / Molecular Phylogenetics and Evolution / Molecular phylogenetics / Genetic variation / Paramecium

Intra-specific differentiation of Paramecium bursaria strains by molecular methods--preliminary studies

Microbiology / Medical Microbiology / Biological Sciences / Phylogeny / Mitochondrial DNA / Animals / Molecular phylogeny / Sibling Species / rDNA / Genetic variation / Species Specificity / Paramecium / Animals / Molecular phylogeny / Sibling Species / rDNA / Genetic variation / Species Specificity / Paramecium

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L2) and D Lineages

Microbiology / Chlamydia trachomatis / Virulence / Phylogeny / Humans / United States / Male / Cluster Analysis / Genotype / Epithelial cells / Adult / HeLa cells / Genetic Recombination / Mbio / United States / Male / Cluster Analysis / Genotype / Epithelial cells / Adult / HeLa cells / Genetic Recombination / Mbio

Complete sequencing of Novosphingobium sp. PP1Y reveals a biotechnologically meaningful metabolic pattern

Biological Sciences / Phylogeny / Quorum Sensing

Comparing RNA secondary structures using a relaxed base-pair score

Algorithms / Thermodynamics / RNA / Computational Biology / Stochastic processes / Phylogeny / Humans / Cluster Analysis / RNA Secondary Structure / Nucleic Acid Conformation / Biochemistry and cell biology / Phylogeny / Humans / Cluster Analysis / RNA Secondary Structure / Nucleic Acid Conformation / Biochemistry and cell biology

A Transposon-Derived DNA Polymerase from Entamoeba histolytica Displays Intrinsic Strand Displacement, Processivity and Lesion Bypass

DNA replication / Multidisciplinary / DNA / Phylogeny / Escherichia coli / Trichomonas vaginalis / PLoS one / Molecular cloning / Isoenzymes / Entamoeba histolytica / Recombinant Proteins / Trichomonas vaginalis / PLoS one / Molecular cloning / Isoenzymes / Entamoeba histolytica / Recombinant Proteins

Molecular approach in spider mites (Acari: Tetranychidae): Preliminary data on ribosomal DNA sequences

Zoology / Phylogeny / Animals / Polymerase Chain Reaction / Acari / Phylogenetic Tree / Genetic variation / Base Sequence / Ribosomal DNA / Nucleotides / DNA sequence / Phylogenetic Tree / Genetic variation / Base Sequence / Ribosomal DNA / Nucleotides / DNA sequence

Genome-wide comparison of cyanobacterial transposable elements, potential genetic diversity indicators

Genetics / Molecular Evolution / Cyanobacteria / Sequence Analysis / Genetic Diversity / Phylogeny / Gene / Protein Sequence Analysis / Insertion sequence / Genetic variation / Amino Acid Profile / Nucleotides / Phylogeny / Gene / Protein Sequence Analysis / Insertion sequence / Genetic variation / Amino Acid Profile / Nucleotides

A photosynthetic alveolate closely related to apicomplexan parasites

Genetics / Photosynthesis / Multidisciplinary / Nature / Phylogeny / Chlorophyll / Animals / Parasites / Cell nucleus / Plasmodium falciparum / Codon / Eukaryotic Cells / Power Modeling / Chlorophyll a / Chlorophyll / Animals / Parasites / Cell nucleus / Plasmodium falciparum / Codon / Eukaryotic Cells / Power Modeling / Chlorophyll a

Parallel Loss of Nuclear-Encoded Mitochondrial Aminoacyl-tRNA Synthetases and mtDNA-Encoded tRNAs in Cnidaria

Evolutionary Biology / Genetics / Computational Biology / Molecular Evolution / Cnidaria / Saccharomyces cerevisiae / Phylogeny / Humans / Animals / Molecular biology and evolution / Cell nucleus / aminoacyl-tRNA synthetase / Biochemistry and cell biology / Saccharomyces cerevisiae / Phylogeny / Humans / Animals / Molecular biology and evolution / Cell nucleus / aminoacyl-tRNA synthetase / Biochemistry and cell biology

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