Molecular Evolution - Page 13

TreeSAAP: Selection on Amino Acid Properties using phylogenetic trees

Bioinformatics / Molecular Evolution / Biological Sciences / Software / Phylogeny / Mathematical Sciences / Goodness of Fit / Proteins / Computer User Interface Design / Protein Sequence Analysis / Source Code / Phylogenetic Tree / Genetic variation / Statistical Test / Amino Acid Sequence / Molecular Sequence Data / Mathematical Sciences / Goodness of Fit / Proteins / Computer User Interface Design / Protein Sequence Analysis / Source Code / Phylogenetic Tree / Genetic variation / Statistical Test / Amino Acid Sequence / Molecular Sequence Data

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Nucleotide Sequences of Cyanophora paradoxa Cellular and Cyanelle-Associated 5S Ribosomal RNAs: The Cyanelle as a Potential Intermediate in Plastid Evolution*

Evolutionary Biology / Genetics / Molecular Evolution / Animals / Green Algae / Structure Analysis / Biological evolution / ribosomal RNA / Secondary Structure / Species Specificity / Base Sequence / Nucleic Acid Conformation / Nucleotides / Biochemistry and cell biology / Organoids / Structure Analysis / Biological evolution / ribosomal RNA / Secondary Structure / Species Specificity / Base Sequence / Nucleic Acid Conformation / Nucleotides / Biochemistry and cell biology / Organoids

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Adaptive Evolution of Class 5 Fimbrial Genes in Enterotoxigenic Escherichia coli and Its Functional Consequences

Crystallography / Molecular Evolution / Biological Chemistry / Biological Sciences / Phylogeny / CHEMICAL SCIENCES / Virulence Factors / Bacterial Adhesion / DNA binding proteins / CHEMICAL SCIENCES / Virulence Factors / Bacterial Adhesion / DNA binding proteins

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Panorama of ancient metazoan macromolecular complexes

Molecular Evolution / Systems Biology / Multidisciplinary / Nature / Humans / Animals / Tandem Mass Spectrometry / Reproducibility of Results / Animals / Tandem Mass Spectrometry / Reproducibility of Results

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Lactase Persistence in Central Asia: Phenotype, Genotype, and Evolution

Genetics / Polymorphism / Molecular Evolution / Life Style / Low Frequency / Natural Selection / Human / Human Biology / Humans / Blood Glucose / Lactose intolerance / Pastoralism / Phenotype / Ethnic Groups / Questionnaires / Genotype / Ethnic Group / Genetic variation / Statistics as Topic / Natural Selection / Human / Human Biology / Humans / Blood Glucose / Lactose intolerance / Pastoralism / Phenotype / Ethnic Groups / Questionnaires / Genotype / Ethnic Group / Genetic variation / Statistics as Topic

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Phylogenetic assessment of the earthworm Aporrectodea caliginosa species complex (Oligochaeta: Lumbricidae) based on mitochondrial and nuclear DNA sequences

Evolutionary Biology / Genetics / Zoology / Phylogenetics / Molecular Evolution / Taxonomy / Morphology / Phylogeny / Mitochondrial DNA / Sequence alignment / Maximum Likelihood / Animals / Molecular Phylogenetics and Evolution / Oligochaeta / nuclear DNA / Molecular phylogenetics / Integrated Approach / Cell nucleus / Maximum Parsimony / Soil Types / Bayes Theorem / Likelihood Functions / DNA sequence / Taxonomy / Morphology / Phylogeny / Mitochondrial DNA / Sequence alignment / Maximum Likelihood / Animals / Molecular Phylogenetics and Evolution / Oligochaeta / nuclear DNA / Molecular phylogenetics / Integrated Approach / Cell nucleus / Maximum Parsimony / Soil Types / Bayes Theorem / Likelihood Functions / DNA sequence

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EST and Mitochondrial DNA Sequences Support a Distinct Pacific Form of Salmon Louse, Lepeophtheirus salmonis

Technology / Population Genetics / Molecular Evolution / Mitochondria / Copepoda / Phylogeny / Environmental Sciences / Mitochondrial DNA / Marine BioTechnology / Marine / Expressed Sequence Tags / Animals / Mitochondrial Genome / Pacific ocean / Genetic variation / Phylogeny / Environmental Sciences / Mitochondrial DNA / Marine BioTechnology / Marine / Expressed Sequence Tags / Animals / Mitochondrial Genome / Pacific ocean / Genetic variation

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The 18S rRNA from Odontophrynus americanus 2 n and 4 n (Amphibia, Anura) reveals unusual extra sequences in the variable region V2

Genetics / Molecular Evolution / Agricultural Biotechnology / Animals / Anura / Genome / Molecular cloning / Secondary Structure / Xenopus laevis / Base Sequence / Ribosomal DNA / Nucleic Acid Conformation / Molecular Sequence Data / Nucleotide substitution / Secondary structure prediction / Genome / Molecular cloning / Secondary Structure / Xenopus laevis / Base Sequence / Ribosomal DNA / Nucleic Acid Conformation / Molecular Sequence Data / Nucleotide substitution / Secondary structure prediction

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Saccharomyces cerevisiae as a Model Organism: A Comparative Study

Research Design / Computational Biology / Molecular Evolution / Forecasting / Comparative Study / Multidisciplinary / Signal Transduction / Saccharomyces cerevisiae / Phylogeny / Animals / Archaea / Bacteria / Homo Sapiens / PLoS one / Pilot study / Theoretical Models / Biological Process / Pilot Projects / Development Time / Multidisciplinary / Signal Transduction / Saccharomyces cerevisiae / Phylogeny / Animals / Archaea / Bacteria / Homo Sapiens / PLoS one / Pilot study / Theoretical Models / Biological Process / Pilot Projects / Development Time

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Tracing Ancient mRNA Hairpins

Molecular Evolution / Sequence Analysis / Bacteria / Mutation Accumulation / Nucleic Acid Conformation / Biochemistry and cell biology

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Defining the Plasticity of Transcription Factor Binding Sites by Deconstructing DNA Consensus Sequences: The PhoP-Binding Sites among Gamma/Enterobacteria

Artificial Intelligence / Machine Learning / Computational Biology / Molecular Evolution / Transcription Regulation / RNA polymerase / Transcription Factors / Gene expression / Biological Sciences / Identification / Sequence alignment / Mathematical Sciences / Cluster Analysis / Genome / Enterobacteriaceae / Genomic DNA / Chromatin Immunoprecipitation / DNA binding / Base Sequence / Binding Site / Nucleic Acid Conformation / Differential Gene Expression / Gene expression profiling / DNA sequence / Molecular Sequence Data / RNA polymerase / Transcription Factors / Gene expression / Biological Sciences / Identification / Sequence alignment / Mathematical Sciences / Cluster Analysis / Genome / Enterobacteriaceae / Genomic DNA / Chromatin Immunoprecipitation / DNA binding / Base Sequence / Binding Site / Nucleic Acid Conformation / Differential Gene Expression / Gene expression profiling / DNA sequence / Molecular Sequence Data

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Ancestral Sequence Reconstruction in Primate Mitochondrial DNA: Compositional Bias and Effect on Functional Inference

Evolutionary Biology / Genetics / Molecular Biology / Molecular Evolution / Mitochondria / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties

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Ancestral Sequence Reconstruction in Primate Mitochondrial DNA: Compositional Bias and Effect on Functional Inference

Evolutionary Biology / Genetics / Molecular Biology / Molecular Evolution / Mitochondria / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties

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From glutathione transferase to pore in a CLIC

Crystallography / Molecular Evolution / Crystal structure / Porosity / Glutathione / Chloride Channel / Bound States / Water soluble polymers / Molecular Conformation / Glutathione Transferase / Amino Acid Sequence / Plasma Membrane / Molecular Structure / Molecular Sequence Data / Chloride Channel / Bound States / Water soluble polymers / Molecular Conformation / Glutathione Transferase / Amino Acid Sequence / Plasma Membrane / Molecular Structure / Molecular Sequence Data

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HLA Class I-Driven Evolution of Human Immunodeficiency Virus Type 1 Subtype C Proteome: Immune Escape and Viral Load

Molecular Evolution / Virology / HIV / Biological Sciences / Phylogeny / South Africa / Humans / South African / Human immunodeficiency virus / Amino Acid Profile / Amino Acid Sequence / Base Sequence / Fitness cost / Viral Load / Molecular Sequence Data / South Africa / Humans / South African / Human immunodeficiency virus / Amino Acid Profile / Amino Acid Sequence / Base Sequence / Fitness cost / Viral Load / Molecular Sequence Data

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Peroxisomal Δ 3 ,Δ 2 -enoyl CoA isomerases and evolution of cytosolic paralogues in embryophytes

Molecular Evolution / Plant Biology / Saccharomyces cerevisiae / Phylogeny / Sequence alignment / Plant / Gene Duplication / Arabidopsis / Peroxisome / Peroxisomes / Amino Acid Sequence / Recombinant Proteins / Gene expression profiling / Molecular Sequence Data / Plant / Gene Duplication / Arabidopsis / Peroxisome / Peroxisomes / Amino Acid Sequence / Recombinant Proteins / Gene expression profiling / Molecular Sequence Data

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