Molecular Evolution

The ENCODE (ENCyclopedia Of DNA Elements) Project

Publishing / Genomics / Computational Biology / Molecular Evolution / Science / Access To Information / Multidisciplinary / Humans / United States / Animals / Proteins / Human Genome / Information Dissemination / Pilot Projects / Internet / Access To Information / Multidisciplinary / Humans / United States / Animals / Proteins / Human Genome / Information Dissemination / Pilot Projects / Internet

Mitogenomics of recombinant mitochondrial genomes of Baltic Sea Mytilus mussels

Genetics / Molecular Evolution / Mitochondrial DNA / Sequence alignment / Female / Animals / Male / Mytilus / Plant Molecular Genetics and Functional Genomics / Genetic Recombination / Base Sequence / Oceans and Seas / Animals / Male / Mytilus / Plant Molecular Genetics and Functional Genomics / Genetic Recombination / Base Sequence / Oceans and Seas

Phylogeography of the armadillo Chaetophractus villosus (Dasypodidae Xenarthra): post-glacial range expansion from Pampas to Patagonia (Argentina)

Evolutionary Biology / Genetics / Zoology / Geography / Population Genetics / Molecular Evolution / Argentina / Phylogeny / Patagonia / Mitochondrial DNA / Range Expansion / Haplotypes / Fossils / Animals / Molecular Phylogenetics and Evolution / Molecular phylogenetics / Control Region / Genetic variation / Armadillos / Molecular Evolution / Argentina / Phylogeny / Patagonia / Mitochondrial DNA / Range Expansion / Haplotypes / Fossils / Animals / Molecular Phylogenetics and Evolution / Molecular phylogenetics / Control Region / Genetic variation / Armadillos

PoInTree: a polar and interactive phylogenetic tree

Algorithms / Molecular Evolution / Biological Sciences / Software / Phylogeny / Genomics and Proteomics / Sequence alignment / Mathematical Sciences / Proteins / Protein Sequence Analysis / Phylogenetic Tree / Genomics and Proteomics / Sequence alignment / Mathematical Sciences / Proteins / Protein Sequence Analysis / Phylogenetic Tree

Molecular evolution by staggered extension process (StEP) in vitro recombination

Molecular Evolution / Multidisciplinary / Protein Engineering / Nature / Mutagenesis / Mutation / Polymerase Chain Reaction / Bacillus subtilis / Genetic Recombination / Recombinant Proteins / Mutation / Polymerase Chain Reaction / Bacillus subtilis / Genetic Recombination / Recombinant Proteins

Two distinct groups of fungal catalase/peroxidases

Computational Biology / Molecular Evolution / Fungi / Horizontal Gene Transfer / Phylogeny / Catalase / Peroxidases / Biochemistry and cell biology / Catalase / Peroxidases / Biochemistry and cell biology

PeroxiBase: a powerful tool to collect and analyse peroxidase sequences from Viridiplantae

Molecular Evolution / Plant Biology / Peroxidase / Experimental Botany / Phylogenetic analysis / Enzyme / Protein Sequence Analysis / Fabaceae / Peroxidases / Biological Process / Amino Acid Sequence / Internet / Enzyme / Protein Sequence Analysis / Fabaceae / Peroxidases / Biological Process / Amino Acid Sequence / Internet

Temporal logics for phylogenetic analysis via model checking

Model Checking / Computational Biology / Molecular Evolution / Biological Sciences / Phylogeny / Sequence alignment / Mathematical Sciences / Phylogenetic analysis / Formal Verification / Automated verification / Temporal Logic / Transition Systems / Sequence alignment / Mathematical Sciences / Phylogenetic analysis / Formal Verification / Automated verification / Temporal Logic / Transition Systems

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

Molecular Biology / Genome assembly / Molecular Evolution / Plant Biology / Science / Life Style / Evolution / Genome Size / Plant Molecular Biology / Multidisciplinary / Next generation sequencing / Enzymes / Plant microbe interactions / Plant diseases / Plant Secondary Metabolism / Genome Analysis / Enzyme / Carbohydrate metabolism / Powdery Mildew / Fungal genome size / Host Pathogen Interactions / Species Specificity / Ascomycota / Life Style / Evolution / Genome Size / Plant Molecular Biology / Multidisciplinary / Next generation sequencing / Enzymes / Plant microbe interactions / Plant diseases / Plant Secondary Metabolism / Genome Analysis / Enzyme / Carbohydrate metabolism / Powdery Mildew / Fungal genome size / Host Pathogen Interactions / Species Specificity / Ascomycota

Species-specific Exon Loss in Human Transcriptomes

Evolutionary Biology / Genetics / Molecular Evolution / Transcriptome / Primates / Humans / Animals / Molecular biology and evolution / Biochemistry and cell biology / Humans / Animals / Molecular biology and evolution / Biochemistry and cell biology

Naked corals: Skeleton loss in Scleractinia

Molecular Evolution / Multidisciplinary / Phylogeny / Fossil record / Mitochondrial DNA / Anthozoa / Animals / Mitochondrial Genome / Calcium Carbonate / Anthozoa / Animals / Mitochondrial Genome / Calcium Carbonate

An Empirical Codon Model for Protein Sequence Evolution

Evolutionary Biology / Genetics / Molecular Evolution / Phylogeny / Mutation / Maximum Likelihood / Molecular biology and evolution / Protein evolution / Protein Sequence Analysis / Codon / Amino Acid Sequence / Likelihood Functions / Biochemistry and cell biology / Markov model / Maximum Likelihood / Molecular biology and evolution / Protein evolution / Protein Sequence Analysis / Codon / Amino Acid Sequence / Likelihood Functions / Biochemistry and cell biology / Markov model

High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

Molecular Evolution / Food Microbiology / Biological Sciences / Phylogeny / Humans / Laboratories / Environment / Laboratories / Environment

Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria

Genetics / Molecular Evolution / Symbiosis / Gene expression / Mutation / Animals / Bacteria / Insects / GC content / Gene / Codon Usage / Amino Acids / Evolutionary rate / Amino Acid Profile / Codon / Species Specificity / Amino Acid Substitution Rates / Animals / Bacteria / Insects / GC content / Gene / Codon Usage / Amino Acids / Evolutionary rate / Amino Acid Profile / Codon / Species Specificity / Amino Acid Substitution Rates

Retinal, pineal and diencephalic expression of frog arylalkylamine N-acetyltransferase-1

Molecular Evolution / Biological Sciences / Phylogeny / Molecular and cellular biology / Humans / Animals / Male / Retina / Enzyme / Molecular cloning / Ranidae / Pineal Gland / Amino Acid Sequence / Base Sequence / Epididymis / Animals / Male / Retina / Enzyme / Molecular cloning / Ranidae / Pineal Gland / Amino Acid Sequence / Base Sequence / Epididymis

A novel human NatA Nα-terminal acetyltransferase complex: hNaa16p-hNaa10p (hNat2-hArd1)

Molecular Evolution / Mass Spectrometry / Phylogeny / Cell line / Humans / Sequence alignment / Cell Death / Peptides / Arylamine N-acetyltransferase / Isoenzymes / Acetylation / Multienzyme complexes / Amino Acid Sequence / Ribosomes / Biochemistry and cell biology / Sequence alignment / Cell Death / Peptides / Arylamine N-acetyltransferase / Isoenzymes / Acetylation / Multienzyme complexes / Amino Acid Sequence / Ribosomes / Biochemistry and cell biology

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