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Sequence alignment
Sequence alignment
RISCI - Repeat Induced Sequence Changes Identifier: a comprehensive, comparative genomics-based, in silico subtractive hybridization pipeline to identify repeat induced sequence changes in closely related genomes
Bioinformatics / Data Mining / Genomics / Polymorphism / Comparative Genomics / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization
Phylogenetic analyses of DNA sequences reveal species partitions amongst isolates of< i> Armillaria</i> from Africa
Microbiology / Africa / Molecular Evolution / Plant Biology / Phylogeny / Sequence alignment / Polymerase Chain Reaction / Molecular cloning / Genetic variation / Base Sequence / DNA sequence / Sequence alignment / Polymerase Chain Reaction / Molecular cloning / Genetic variation / Base Sequence / DNA sequence
Activity pattern similarity: a multidimensional sequence alignment method
Applied Mathematics / Sequence alignment / Activity Analysis / Euclidean Distance / Information Embedding
Purification, Characterization and Partial Amino Acid Sequencing of Hydroxycinnamoyl-CoA: Tyramine N-(hydroxycinnamoyl)transferase from Tobacco Cell-Suspension Cultures
Engineering / Biochemistry / Technology / Chromatography / Kinetics / Hydroxyapatite / Tobacco / Calcium / Enzyme Inhibitors / Biological Chemistry / Snake venoms / Western blotting / Biological Sciences / Humans / Sequence alignment / Liver / Circular Dichroism / Animals / Male / Anura / Plants / Rat Brain / Trypsin / Proteins / Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis / Organophosphorus Compounds / tESTIS / High Pressure Liquid Chromatography / Goats / CHEMICAL SCIENCES / European / Amino Acids / Rats / Guanosine Triphosphate / Substrate Specificity / Cooperativity / Molecular Mass / Molecular weight / Nerve Growth Factor / Hydroxyapatites / Amino Acid Sequence / Durapatite / Hydrogen-Ion Concentration / PLANT PROTEINS / Binding Site / Conformational Change / Gtp Binding Proteins / Molecular and Cellular Biochemistry / Biochemistry and cell biology / Cell Suspension Culture / Ouabain / Ammonium Sulphate / Hydroxyapatite / Tobacco / Calcium / Enzyme Inhibitors / Biological Chemistry / Snake venoms / Western blotting / Biological Sciences / Humans / Sequence alignment / Liver / Circular Dichroism / Animals / Male / Anura / Plants / Rat Brain / Trypsin / Proteins / Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis / Organophosphorus Compounds / tESTIS / High Pressure Liquid Chromatography / Goats / CHEMICAL SCIENCES / European / Amino Acids / Rats / Guanosine Triphosphate / Substrate Specificity / Cooperativity / Molecular Mass / Molecular weight / Nerve Growth Factor / Hydroxyapatites / Amino Acid Sequence / Durapatite / Hydrogen-Ion Concentration / PLANT PROTEINS / Binding Site / Conformational Change / Gtp Binding Proteins / Molecular and Cellular Biochemistry / Biochemistry and cell biology / Cell Suspension Culture / Ouabain / Ammonium Sulphate
Arsenite Oxidase, an Ancient Bioenergetic Enzyme
Evolutionary Biology / Genetics / Molecular Biology / Phylogeny / Sequence alignment / Archaea / Oxidoreductases / Bacteria / Molecular biology and evolution / Membrane transport proteins / Enzyme / Spectrum analysis / Amino Acid Sequence / Biochemistry and cell biology / Archaea / Oxidoreductases / Bacteria / Molecular biology and evolution / Membrane transport proteins / Enzyme / Spectrum analysis / Amino Acid Sequence / Biochemistry and cell biology
High-density mutagenesis by combined DNA shuffling and phage display to assign essential amino acid residues in protein-protein interactions: application to study structure-function of plasminogen activation inhibitor 1 (PAI-I)
Molecular Biology / Recombinant DNA Technology / Protein-Protein Interaction / Humans / Mutagenesis / Sequence alignment / Mice / Animals / Epitope mapping / Phage display / Surface plasmon resonance / Monoclonal Antibodies / Shell Half-Life / Molecular cloning / Surface Area / Amino Acid Profile / High Density Concrete / Monoclonal Antibody / Tissue Plasminogen Activator / Amino Acid Substitution Rates / Structure activity Relationship / Protein Binding / D structure / Structure Function / Epitopes / Plasminogen Activator Inhibitor / Biochemistry and cell biology / Sequence alignment / Mice / Animals / Epitope mapping / Phage display / Surface plasmon resonance / Monoclonal Antibodies / Shell Half-Life / Molecular cloning / Surface Area / Amino Acid Profile / High Density Concrete / Monoclonal Antibody / Tissue Plasminogen Activator / Amino Acid Substitution Rates / Structure activity Relationship / Protein Binding / D structure / Structure Function / Epitopes / Plasminogen Activator Inhibitor / Biochemistry and cell biology
Alternative expression analysis by RNA sequencing
Technology / Gene expression / Nature / Colorectal cancer / Quantitative PCR / Biological Sciences / Cell line / Humans / Sequence alignment / Expressed Sequence Tags / Alternative splicing / Source Code / Alternative Splicing / Protein isoforms / Sensitivity and Specificity / Expression analysis / Gene expression profiling / Colorectal Neoplasms / Biological Sciences / Cell line / Humans / Sequence alignment / Expressed Sequence Tags / Alternative splicing / Source Code / Alternative Splicing / Protein isoforms / Sensitivity and Specificity / Expression analysis / Gene expression profiling / Colorectal Neoplasms
A hierarchical model for incomplete alignments in phylogenetic inference
Bioinformatics / Algorithms / Computational Biology / Biological Sciences / Phylogeny / Sequence alignment / Mathematical Sciences / Expressed Sequence Tags / Protein Sequence Analysis / Bayesian hierarchical model / Bayes Theorem / Sequence alignment / Mathematical Sciences / Expressed Sequence Tags / Protein Sequence Analysis / Bayesian hierarchical model / Bayes Theorem
Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia
Drosophila melanogaster / Transcription Factors / Biological Sciences / Saccharomyces cerevisiae / RNA interference / Humans / Sequence alignment / Mutation / Mice / Animals / Ribosomal proteins / Base Sequence / Site-directed Mutagenesis / Exome / Polyribosomes / Humans / Sequence alignment / Mutation / Mice / Animals / Ribosomal proteins / Base Sequence / Site-directed Mutagenesis / Exome / Polyribosomes
IgA deficiency in wolves
Immunology / Dogs / Sequence alignment / Animals / Natural Sciences / Wolves / Amino Acid Sequence / Wolves / Amino Acid Sequence
Structural and functional characterisation of an influenza virus RNA polymerase-genomic RNA complex
Microbiology / Zoology / Immunology / Molecular Biology / Structural Biology / Biomaterials / Tissue Engineering / Medical Microbiology / Virology / Wastewater Treatment / Hydrogels / Transcription Factors / Multidisciplinary / Extracellular Matrix / Animal Production / Molecular Mechanics / Enzyme Kinetics / Immunogenetics / Catalytic Mechanism / Biological Sciences / Protein Structure and Function / Crystal structure / Molecular Immunology / Heparin / Sequence alignment / Basement Membrane / Biological Wastewater Treatment / Mice / Animals / Blood / Polymerase Chain Reaction / Physical sciences / Special functions / Detoxification / Fisheries Sciences / Fibroblast Growth Factor / Glycosaminoglycan / Transcription Factor / Enzyme / Clinical Sciences / Active site / Polyvinyl alcohol / Poly Vinyl Alcohol / Amino Acid Profile / Veterinary Sciences / Biological activity / Amino Acid Sequence / Base Sequence / Materials Testing / Growth Factor / Structure activity Relationship / Protein Binding / D structure / Biocompatible Materials / Cell Surface Markers / Cardiovascular Magnetic Resonance / Site-directed Mutagenesis / Binding Site / Biochemistry and cell biology / Biomechanical Phenomena / Biomaterials / Tissue Engineering / Medical Microbiology / Virology / Wastewater Treatment / Hydrogels / Transcription Factors / Multidisciplinary / Extracellular Matrix / Animal Production / Molecular Mechanics / Enzyme Kinetics / Immunogenetics / Catalytic Mechanism / Biological Sciences / Protein Structure and Function / Crystal structure / Molecular Immunology / Heparin / Sequence alignment / Basement Membrane / Biological Wastewater Treatment / Mice / Animals / Blood / Polymerase Chain Reaction / Physical sciences / Special functions / Detoxification / Fisheries Sciences / Fibroblast Growth Factor / Glycosaminoglycan / Transcription Factor / Enzyme / Clinical Sciences / Active site / Polyvinyl alcohol / Poly Vinyl Alcohol / Amino Acid Profile / Veterinary Sciences / Biological activity / Amino Acid Sequence / Base Sequence / Materials Testing / Growth Factor / Structure activity Relationship / Protein Binding / D structure / Biocompatible Materials / Cell Surface Markers / Cardiovascular Magnetic Resonance / Site-directed Mutagenesis / Binding Site / Biochemistry and cell biology / Biomechanical Phenomena
Human copper transporter 2 is localized in late endosomes and lysosomes and facilitates cellular copper uptake
Biological Sciences / Humans / Sequence alignment / Copper / Biochemical / CHEMICAL SCIENCES / HeLa cells / Transfection / Amino Acid Sequence / Lysosomes / Endosomes / CHEMICAL SCIENCES / HeLa cells / Transfection / Amino Acid Sequence / Lysosomes / Endosomes
Screening of basidiomycetes and xylariaceous fungi for lignin peroxidase and laccase gene-specific sequences
Microbiology / Plant Biology / Phylogeny / Peroxidase / Sequence alignment / Polymerase Chain Reaction / Laccase / Molecular cloning / Peroxidases / Amino Acid Sequence / Ascomycota / BASIDIOMYCOTA / Polymerase Chain Reaction / Laccase / Molecular cloning / Peroxidases / Amino Acid Sequence / Ascomycota / BASIDIOMYCOTA
A DNA polymerase V homologue encoded by TOL plasmid pWW0 confers evolutionary fitness on Pseudomonas putida under conditions of environmental stress
Genetics / Bacteriology / DNA damage / Biological Sciences / Sequence alignment / Pseudomonas putida / Plasmids / Biological evolution / Natural Environment / Time Factors / UV irradiation / Environmental Stress / Base Sequence / Population dynamic / DNA Polymerase / Pseudomonas putida / Plasmids / Biological evolution / Natural Environment / Time Factors / UV irradiation / Environmental Stress / Base Sequence / Population dynamic / DNA Polymerase
A DNA Polymerase V Homologue Encoded by TOL Plasmid pWW0 Confers Evolutionary Fitness on Pseudomonas putida under Conditions of Environmental Stress
Genetics / Bacteriology / DNA damage / Biological Sciences / Sequence alignment / Pseudomonas putida / Plasmids / Biological evolution / Natural Environment / Time Factors / UV irradiation / Environmental Stress / Base Sequence / Population dynamic / DNA Polymerase / Pseudomonas putida / Plasmids / Biological evolution / Natural Environment / Time Factors / UV irradiation / Environmental Stress / Base Sequence / Population dynamic / DNA Polymerase
Characterizing the Roles of Cryphonectria parasitica RNA-Dependent RNA Polymerase-Like Genes in Antiviral Defense, Viral Recombination and Transposon Transcript Accumulation
Multidisciplinary / RNA viruses / Gene Silencing / Sequence alignment / PLoS one / Genetic Recombination / Fungal genome size / Host Pathogen Interactions / Protein isoforms / Amino Acid Sequence / Ascomycota / Genetic Recombination / Fungal genome size / Host Pathogen Interactions / Protein isoforms / Amino Acid Sequence / Ascomycota
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