Gene expression profiling

A systems-level integrative framework for genome-wide DNA methylation and gene expression data identifies differential gene expression modules under epigenetic control

Bioinformatics / Algorithms / Cell Differentiation / Humans / Female / DNA methylation / Genome / Gene Regulatory Networks / Human Genome / Gene Expression Regulation / Gene expression profiling / DNA methylation / Genome / Gene Regulatory Networks / Human Genome / Gene Expression Regulation / Gene expression profiling

R/qtl: QTL mapping in experimental crosses

Bioinformatics / Algorithms / QTL mapping / Biological Sciences / Software / Humans / Markov chains / Mathematical Sciences / Genetic Map / Genome / Statistical software / Interactive Learning Environment / Genotype / Inbreeding / Quantitative Trait Loci / Genetic Markers / Gene expression profiling / Humans / Markov chains / Mathematical Sciences / Genetic Map / Genome / Statistical software / Interactive Learning Environment / Genotype / Inbreeding / Quantitative Trait Loci / Genetic Markers / Gene expression profiling

Transcriptional profile of Paracoccidioides induced by oenothein B, a potential antifungal agent from the Brazilian Cerrado plant Eugenia uniflora

Computational Biology / Brazil / Transcriptome / Biological Sciences / Antifungal Agents / Itraconazole / Ergosterol / Eugenia / Paracoccidioides / Gene expression profiling / Itraconazole / Ergosterol / Eugenia / Paracoccidioides / Gene expression profiling

Differential gene expression analysis using coexpression and RNA-Seq data

Bioinformatics / Algorithms / Biological Sciences / Markov chains / Mathematical Sciences / Gene expression profiling

Predominant clonal evolution leads to a close parity between gene expression profiles and subspecific phylogeny in Trypanosoma cruzi

Polymorphism / Molecular Evolution / Horizontal Gene Transfer / Gene expression / Natural Selection / Biological Sciences / Phylogeny / Animals / DNA fingerprinting / Chagas disease / Phylogenetic Diversity / Electrophoresis / Trypanosoma Cruzi / Genetic Recombination / Genetic variation / Protozoan Proteins / Gene expression profiling / DNA sequence / Differential expression / Biological Sciences / Phylogeny / Animals / DNA fingerprinting / Chagas disease / Phylogenetic Diversity / Electrophoresis / Trypanosoma Cruzi / Genetic Recombination / Genetic variation / Protozoan Proteins / Gene expression profiling / DNA sequence / Differential expression

Adaptations to Endosymbiosis in a Cnidarian-Dinoflagellate Association: Differential Gene Expression and Specific Gene Duplications

Genetics / Geography / Symbiosis / Membrane Proteins / France / Transcriptome / Mediterranean Sea / Phylogeny / Animals / Host-parasite interactions / Coral Reef / Gene Duplication / Carbonic anhydrase / Time Factors / PLoS Genetics / Sea anemones / Amino Acid Sequence / Calcium Binding Proteins / Epidermal Stem Cells / *Hot Temperature / Differential Gene Expression / cDNA library / Gene expression profiling / Cell Adhesion Molecules / Tissue Specificity / Differential expression / Transcriptome / Mediterranean Sea / Phylogeny / Animals / Host-parasite interactions / Coral Reef / Gene Duplication / Carbonic anhydrase / Time Factors / PLoS Genetics / Sea anemones / Amino Acid Sequence / Calcium Binding Proteins / Epidermal Stem Cells / *Hot Temperature / Differential Gene Expression / cDNA library / Gene expression profiling / Cell Adhesion Molecules / Tissue Specificity / Differential expression

Decellularized Allogeneic Heart Valves Demonstrate Self-Regeneration Potential after a Long-Term Preclinical Evaluation

Engineering / Physics / Chemistry / Regeneration / Biology / Immunohistochemistry / Medicine / Multidisciplinary / Animals / Allografts / PLoS one / Cell Shape / Immunophenotyping / Sus Scrofa / Cell Survival / Gene expression profiling / Immunohistochemistry / Medicine / Multidisciplinary / Animals / Allografts / PLoS one / Cell Shape / Immunophenotyping / Sus Scrofa / Cell Survival / Gene expression profiling

Temporal expression of extracellular products of Staphylococcus aureus in vivo mouse cage model

Mice / Animals / Staphylococcus aureus / Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis / Clinical Sciences / Time Factors / Polytetrafluoroethylene / Gene expression profiling / Time Factors / Polytetrafluoroethylene / Gene expression profiling

‘Working’ cardiomyocytes exhibiting plateau action potentials from human placenta-derived extraembryonic mesodermal cells

Immunohistochemistry / Stem Cell / Heart Failure / Cell Differentiation / Humans / Placenta / Mice / Female / Animals / Embryonic Stem Cell / Male / Mesenchymal Stem Cell / Cell Transplantation / Clinical Sciences / Action potential / Connexin / Primary Culture / Action Potentials / Sex Chromosome / Clinical Application / Troponin I / Bone Marrow Cells / Biochemistry and cell biology / Gene expression profiling / Placenta / Mice / Female / Animals / Embryonic Stem Cell / Male / Mesenchymal Stem Cell / Cell Transplantation / Clinical Sciences / Action potential / Connexin / Primary Culture / Action Potentials / Sex Chromosome / Clinical Application / Troponin I / Bone Marrow Cells / Biochemistry and cell biology / Gene expression profiling

Strategies for comparing gene expression profiles from different microarray platforms: Application to a case–control experiment

Analytical Chemistry / Computational Biology / Sample Preparation / Humans / Female / Polymerase Chain Reaction / Gene ontology / Analytical / Meta Analysis / Stilbenes / Reproducibility of Results / High Density Concrete / Analytical Biochemistry / Sensitivity and Specificity / Biochemistry and cell biology / Microarray Data / Gene Expression Regulation / Gene expression profiling / Case Control Studies / Polymerase Chain Reaction / Gene ontology / Analytical / Meta Analysis / Stilbenes / Reproducibility of Results / High Density Concrete / Analytical Biochemistry / Sensitivity and Specificity / Biochemistry and cell biology / Microarray Data / Gene Expression Regulation / Gene expression profiling / Case Control Studies

A Comprehensive Analysis of Genes Encoding Small Secreted Proteins Identifies Candidate Effectors in Melampsora larici-populina (Poplar Leaf Rust)

Genetics / Microbiology / Plant Biology / Plant Molecular Biology / Populus / Plant diseases / Biological evolution / Molecular Plant Microbe Interactions / Time Factors / Host Pathogen Interactions / BASIDIOMYCOTA / Gene expression profiling / Plant Leaves / Plant diseases / Biological evolution / Molecular Plant Microbe Interactions / Time Factors / Host Pathogen Interactions / BASIDIOMYCOTA / Gene expression profiling / Plant Leaves

Early gene expression programs accompanying trans -differentiation of epidermal cells of Vicia faba cotyledons into transfer cells

Cell Division / Biological Sciences / Vicia faba / Gene Expression Programming / Cell Wall / Epidermal Stem Cells / PLANT PROTEINS / Protein Biosynthesis / Gene expression profiling / Plant Epidermis / Epidermal Stem Cells / PLANT PROTEINS / Protein Biosynthesis / Gene expression profiling / Plant Epidermis

The orphan receptor GPR17 identified as a new dual uracil nucleotides/cysteinyl-leukotrienes receptor

Membrane Proteins / Biological Sciences / Cercopithecus aethiops / Brain / Humans / Mice / G protein-coupled receptors / Animals / Male / Brain Ischemia / Neurons / Protein Sequence Analysis / Rats / Cysteine / Amino Acid Sequence / Nucleotides / Gene expression profiling / Mice / G protein-coupled receptors / Animals / Male / Brain Ischemia / Neurons / Protein Sequence Analysis / Rats / Cysteine / Amino Acid Sequence / Nucleotides / Gene expression profiling

Molecular characterization of three Lactobacillus delbrueckii subsp. bulgaricus phages

Bacteriophages / Transmission Electron Microscopy / Multidisciplinary / Food Microbiology / Applied Environmental Microbiology / Gene Order / Host Specificity / Gene expression profiling / Synteny / Gene Order / Host Specificity / Gene expression profiling / Synteny

From genomes to vaccines: Leishmania as a model

Leishmania / Biological Sciences / Humans / Animals / DNA vaccines / Protozoan Proteins / Proteome / Gene expression profiling / Protozoan Proteins / Proteome / Gene expression profiling

Human cytosolic sulfotransferase database mining: identification of seven novel genes and pseudogenes

Computational Biology / Gorilla / Humans / Mice / Animals / Male / The / Pan troglodytes / Chickens / Amino Acid Sequence / Pseudogenes / Gene expression profiling / Male / The / Pan troglodytes / Chickens / Amino Acid Sequence / Pseudogenes / Gene expression profiling
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