BMC Bioinformatics

A procedure to decompose high resolution mass spectra

Biological Sciences / Mathematical Sciences / BMC Bioinformatics

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RISCI - Repeat Induced Sequence Changes Identifier: a comprehensive, comparative genomics-based, in silico subtractive hybridization pipeline to identify repeat induced sequence changes in closely related genomes

Bioinformatics / Data Mining / Genomics / Polymorphism / Comparative Genomics / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization

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Bayesian semiparametric regression models to characterize molecular evolution

Molecular Evolution / Biological Sciences / Sequence alignment / Computer Simulation / Mathematical Sciences / BMC Bioinformatics / Proteins / Amino Acids / Bayes Theorem / BMC Bioinformatics / Proteins / Amino Acids / Bayes Theorem

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Bayesian model to detect phenotype-specific genes for copy number data

Algorithms / Biological Sciences / Humans / Computer Simulation / Genetic Testing / Mathematical Sciences / Female / Male / BMC Bioinformatics / Gene Dosage / Phenotype / Genotype / Bayes Theorem / Mathematical Sciences / Female / Male / BMC Bioinformatics / Gene Dosage / Phenotype / Genotype / Bayes Theorem

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Compression of next-generation sequencing quality scores using memetic algorithm

Algorithms / Data Compression / Biological Sciences / Mathematical Sciences / BMC Bioinformatics

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Molecular ecological network analyses

Soil / Computational Biology / Ecology / Metagenomics / Biological Sciences / Software / Mathematical Sciences / Temperature / BMC Bioinformatics / Soil Microbiology / Ecosystem / Software / Mathematical Sciences / Temperature / BMC Bioinformatics / Soil Microbiology / Ecosystem

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Molecular ecological network analyses

Soil / Computational Biology / Ecology / Metagenomics / Biological Sciences / Software / Mathematical Sciences / Temperature / BMC Bioinformatics / Soil Microbiology / Ecosystem / Software / Mathematical Sciences / Temperature / BMC Bioinformatics / Soil Microbiology / Ecosystem

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Piecewise multivariate modelling of sequential metabolic profiling data

Metabolism / Computational Biology / Time Series / Kinetics / Principal Component Analysis / Systems Biology / Multivariate Analysis / Biological Sciences / Computer Simulation / Mathematical Sciences / Multivariate Time Series / Animals / BMC Bioinformatics / Time Series Data / Biological systems / Rats / Time Factors / Dynamic Response / Reference Values / Time Course / Predictive value of tests / Mercuric Chloride / Systems Biology / Multivariate Analysis / Biological Sciences / Computer Simulation / Mathematical Sciences / Multivariate Time Series / Animals / BMC Bioinformatics / Time Series Data / Biological systems / Rats / Time Factors / Dynamic Response / Reference Values / Time Course / Predictive value of tests / Mercuric Chloride

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Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering

Algorithms / Biological Sciences / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Codon Usage / Clustering Method / S100 protein family / Base Sequence / Protein Classification / Molecular Sequence Data / Codon Usage / Clustering Method / S100 protein family / Base Sequence / Protein Classification / Molecular Sequence Data

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eL-DASionator: an LDAS upload file generator

Life Sciences / Database Management Systems / Biological Sciences / DNA / Software / Mathematical Sciences / DNA sequence design / BMC Bioinformatics / Software Tool / Base Sequence / Web Interface / DNA sequence / Mathematical Sciences / DNA sequence design / BMC Bioinformatics / Software Tool / Base Sequence / Web Interface / DNA sequence

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Conditional clustering of temporal expression profiles

Algorithms / Gene expression / Signal Transduction / Biological Sciences / Computer Simulation / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Clustered Data / Clustering Method / Proteome / Time Course / Gene expression profiling / Linear Transformation / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Clustered Data / Clustering Method / Proteome / Time Course / Gene expression profiling / Linear Transformation

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Sex genes for genomic analysis in human brain: internal controls for comparison of probe level data extraction

Algorithms / Genomics / Computational Biology / Statistical Analysis / Drosophila melanogaster / Biological Control / Gene expression / Prefrontal Cortex / Quality Control / Sexual dimorphism / Biological Sciences / DNA / Internal Control / Multiple testing / Phylogeny / Humans / Sex Difference / Mathematical Sciences / Female / Animals / Statistical Techniques in Spatial Analysis / Male / Sex chromosomes / Word Frequency / Data Quality / Genome Analysis / BMC Bioinformatics / Genome / Human Brain / Genetic linkage analysis / Gold Standard / Mode of action / Sex Differentiation / False discovery rate / X chromosome / Indexation / Large Scale / Gene Expression Analysis / Sensitivity and Specificity / Experimental Data / Internet / Data Extraction / DNA-footprinting / Sex Chromosome / Microarray Data / Gene expression profiling / False Negative / Relative Position / Differential expression / Biological Control / Gene expression / Prefrontal Cortex / Quality Control / Sexual dimorphism / Biological Sciences / DNA / Internal Control / Multiple testing / Phylogeny / Humans / Sex Difference / Mathematical Sciences / Female / Animals / Statistical Techniques in Spatial Analysis / Male / Sex chromosomes / Word Frequency / Data Quality / Genome Analysis / BMC Bioinformatics / Genome / Human Brain / Genetic linkage analysis / Gold Standard / Mode of action / Sex Differentiation / False discovery rate / X chromosome / Indexation / Large Scale / Gene Expression Analysis / Sensitivity and Specificity / Experimental Data / Internet / Data Extraction / DNA-footprinting / Sex Chromosome / Microarray Data / Gene expression profiling / False Negative / Relative Position / Differential expression

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FastGroup: a program to dereplicate libraries of 16S rDNA sequences

Algorithms / Programming Languages / Computational Biology / Java Programming / Biological Sciences / Software / Sequence alignment / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Very high throughput / Large Dataset Analysis / DNA sequence / Software / Sequence alignment / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Very high throughput / Large Dataset Analysis / DNA sequence

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Lateral gene transfer, rearrangement, reconciliation

Algorithms / Molecular Evolution / Cyanobacteria / Horizontal Gene Transfer / Biological Sciences / Software / Mathematical Sciences / BMC Bioinformatics / Genome / Gene Duplication / Software / Mathematical Sciences / BMC Bioinformatics / Genome / Gene Duplication

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RISCI - Repeat Induced Sequence Changes Identifier: a comprehensive, comparative genomics-based, in silico subtractive hybridization pipeline to identify repeat induced sequence changes in closely related genomes

Bioinformatics / Data Mining / Genomics / Polymorphism / Comparative Genomics / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization

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Piecewise multivariate modelling of sequential metabolic profiling data

Metabolism / Computational Biology / Time Series / Kinetics / Principal Component Analysis / Systems Biology / Multivariate Analysis / Biological Sciences / Computer Simulation / Mathematical Sciences / Multivariate Time Series / Animals / BMC Bioinformatics / Time Series Data / Biological systems / Rats / Time Factors / Dynamic Response / Reference Values / Time Course / Predictive value of tests / Systems Biology / Multivariate Analysis / Biological Sciences / Computer Simulation / Mathematical Sciences / Multivariate Time Series / Animals / BMC Bioinformatics / Time Series Data / Biological systems / Rats / Time Factors / Dynamic Response / Reference Values / Time Course / Predictive value of tests

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